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GWAS-related eQTLs across different cancer types

We identified 337,131 eQTLs that overlap with GWAS linkage disequilibrium (LD) regions (r² ≥ 0.5).



e.g., "STAD"
e.g., "r²>= 0.8"
e.g., "rs2273"
Cancer type
eQTL type
tagSNP
LD
SNP ID
SNP position (hg19)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-value
GWAS-Traits
THCA cis rs2239557 1 rs4903202 chr14:74660302 C14orf45 chr14:74486059-74549566:+ -0.16 -4.58 6.0E-6 Common traits (Other)
THCA cis rs2239557 1 rs4903202 chr14:74660302 COQ6 chr14:74416643-74429811:+ -0.13 -3.62 0.000329 Common traits (Other)
THCA cis rs2239557 1 rs4903202 chr14:74660302 LIN52 chr14:74551656-74667117:+ -0.51 -13.7 2.72E-36 Common traits (Other)
THCA cis rs2239557 1 rs4903203 chr14:74660508 C14orf45 chr14:74486059-74549566:+ -0.16 -4.58 6.0E-6 Common traits (Other)
THCA cis rs2239557 1 rs4903203 chr14:74660508 COQ6 chr14:74416643-74429811:+ -0.13 -3.62 0.000329 Common traits (Other)
THCA cis rs2239557 1 rs4903203 chr14:74660508 LIN52 chr14:74551656-74667117:+ -0.51 -13.7 2.72E-36 Common traits (Other)
THCA cis rs910316 1 rs4903275 chr14:75512509 EIF2B2 chr14:75469612-75476292:+ 0.18 5 7.94E-7 Height
THCA cis rs910316 1 rs4903275 chr14:75512509 MLH3 chr14:75480467-75518235:- 0.3 8.98 6.04E-18 Height
THCA cis rs910316 1 rs4903275 chr14:75512509 RPS6KL1 chr14:75372347-75389958:- 0.33 7.21 2.26E-12 Height
THCA cis rs910316 1 rs4903279 chr14:75546583 EIF2B2 chr14:75469612-75476292:+ 0.19 5.13 4.3E-7 Height
THCA cis rs910316 1 rs4903279 chr14:75546583 MLH3 chr14:75480467-75518235:- 0.3 9.04 3.85E-18 Height
THCA cis rs910316 1 rs4903279 chr14:75546583 RPS6KL1 chr14:75372347-75389958:- 0.32 6.92 1.5E-11 Height
THCA cis rs910316 1 rs4903281 chr14:75554361 EIF2B2 chr14:75469612-75476292:+ 0.18 4.99 8.36E-7 Height
THCA cis rs910316 1 rs4903281 chr14:75554361 MLH3 chr14:75480467-75518235:- 0.29 8.72 4.78E-17 Height
THCA cis rs910316 1 rs4903281 chr14:75554361 RPS6KL1 chr14:75372347-75389958:- 0.32 6.82 2.82E-11 Height